7T83
Structure of angiotensin II type I receptor (AT1R) nanobody antagonist AT118i4h32
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.033 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.110, 85.400, 84.440 |
Unit cell angles | 90.00, 108.64, 90.00 |
Refinement procedure
Resolution | 31.480 - 2.100 |
R-factor | 0.2094 |
Rwork | 0.208 |
R-free | 0.25660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yc7 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.442 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.500 | 31.500 | 2.220 |
High resolution limit [Å] | 2.100 | 6.240 | 2.100 |
Rmerge | 0.068 | 0.044 | 1.563 |
Rmeas | 0.074 | 0.048 | 1.693 |
Number of reflections | 62725 | 2470 | 10010 |
<I/σ(I)> | 12.05 | 37.61 | 0.96 |
Completeness [%] | 98.9 | 98.9 | 97.8 |
Redundancy | 6.828 | 6.439 | 6.762 |
CC(1/2) | 0.998 | 0.997 | 0.724 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.6 | 293 | 16% PEG 4000, 10% isopropanol, 0.1 M sodium citrate pH 5.6 |