7T2T
SARS-CoV2 Mpro native form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 114.170, 53.440, 44.870 |
Unit cell angles | 90.00, 103.02, 90.00 |
Refinement procedure
Resolution | 38.890 - 1.450 |
R-factor | 0.1574 |
Rwork | 0.155 |
R-free | 0.20010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB code: 7k6d |
RMSD bond length | 0.008 |
RMSD bond angle | 1.472 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.890 | 38.890 | 1.490 |
High resolution limit [Å] | 1.450 | 6.480 | 1.450 |
Rmerge | 0.072 | 0.043 | 1.391 |
Rmeas | 0.075 | 0.045 | 1.506 |
Total number of observations | 535143 | ||
Number of reflections | 46003 | 546 | 3362 |
<I/σ(I)> | 15.98 | 40.54 | 1.76 |
Completeness [%] | 98.4 | 97.7 | 98.4 |
Redundancy | 11.633 | 12.817 | 6.775 |
CC(1/2) | 0.999 | 0.999 | 0.681 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 30% PEG 3350, 0.1 M Bis-tris propane pH 7.0 |