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7SUV

APE1 exonuclease substrate complex with 8oxoG opposite A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-10
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths71.112, 66.486, 91.983
Unit cell angles90.00, 110.69, 90.00
Refinement procedure
Resolution24.960 - 1.990
R-factor0.2274
Rwork0.226
R-free0.26490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dfi
RMSD bond length0.008
RMSD bond angle1.011
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0002.030
High resolution limit [Å]1.9902.000
Rmeas0.1450.674
Rpim0.0630.404
Number of reflections96631189625
<I/σ(I)>15.041.71
Completeness [%]98.696.9
Redundancy3.72.5
CC(1/2)0.829
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5293.157 - 14% PEG20000, 100 mM sodium citrate, 15% glycerol, 5 mM calcium chloride

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