7SU6
DIHYDRONEOPTERIN ALDOLASE (DHNA) Lys98Ala FROM YERSINIA PESTIS CO-CRYSTALLIZED with 7,8-dihydroneopterin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-20 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 71.426, 79.248, 96.549 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.230 - 2.150 |
R-factor | 0.2442 |
Rwork | 0.241 |
R-free | 0.29190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ojo |
RMSD bond length | 0.009 |
RMSD bond angle | 0.541 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.190 |
High resolution limit [Å] | 2.150 | 5.830 | 2.150 |
Rmerge | 0.093 | 0.037 | 0.669 |
Rmeas | 0.105 | 0.042 | 0.839 |
Rpim | 0.047 | 0.020 | 0.497 |
Total number of observations | 134900 | ||
Number of reflections | 30248 | 1673 | 1473 |
<I/σ(I)> | 7.6 | ||
Completeness [%] | 99.5 | 99.6 | 99.1 |
Redundancy | 4.5 | 4.4 | 2.3 |
CC(1/2) | 0.998 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.05 - 0.1M BisTris, 0.1-0.2 M CaCl2, 0 - 0.1M NaCl, 43 - 49% MPD |