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7SEO

Crystal Structure of Caspase-3 with Peptide Inhibitor Ac-VDV(DAB)D-CHO

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]80
Detector technologyPIXEL
Collection date2021-07-17
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths50.464, 66.127, 83.468
Unit cell angles90.00, 90.87, 90.00
Refinement procedure
Resolution19.900 - 3.250
R-factor0.1928
Rwork0.189
R-free0.26320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2h65
Data reduction softwareautoPROC
Data scaling softwareAimless (0.7.4)
Phasing softwareREFMAC
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]83.46083.4603.430
High resolution limit [Å]3.25010.2803.250
Rmerge0.0960.0350.207
Rmeas0.1220.0450.261
Rpim0.0740.0280.156
Total number of observations190276382359
Number of reflections82152821076
<I/σ(I)>5.28.83.3
Completeness [%]93.494.984.3
Redundancy2.32.32.2
CC(1/2)0.9900.9970.942
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.329315% PEG 6000, 5% Glycerol, 100mM Sodium Citrate (pH 5.3), 10mM DTT, 3mM NaN3

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