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7S83

Crystal structure of SARS CoV-2 Spike Receptor Binding Domain in complex with shark neutralizing VNARs ShAb01 and ShAb02

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2021-04-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.987
Spacegroup nameP 21 21 21
Unit cell lengths51.052, 62.791, 147.858
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.520
R-factor0.2352
Rwork0.233
R-free0.27810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4q9b
RMSD bond length0.002
RMSD bond angle0.493
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]73.9302.600
High resolution limit [Å]2.5002.500
Number of reflections307051609
<I/σ(I)>11.57
Completeness [%]99.5
Redundancy13
CC(1/2)0.9960.375
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29314.5% PEG20000, 0.1M HEPES pH7.0

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