7ROR
Plasmodium falciparum tyrosyl-tRNA synthetase in complex with tyrosine-AMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 137.612, 46.597, 141.402 |
Unit cell angles | 90.00, 93.81, 90.00 |
Refinement procedure
Resolution | 47.650 - 1.800 |
R-factor | 0.1795 |
Rwork | 0.178 |
R-free | 0.21780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vgj |
RMSD bond length | 0.013 |
RMSD bond angle | 1.255 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.650 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmeas | 0.069 | 2.298 |
Rpim | 0.036 | 0.862 |
Number of reflections | 83538 | 4539 |
<I/σ(I)> | 13.3 | 0.9 |
Completeness [%] | 100.0 | |
Redundancy | 6.9 | |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.25 M sodium malonate, pH 6 |