7RJP
Crystal structure of human Bromodomain containing protein 4 (BRD4) in complex with SHMT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.043, 51.560, 57.384 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.070 - 1.250 |
R-factor | 0.1497 |
Rwork | 0.148 |
R-free | 0.17380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mxf |
Data reduction software | XDS |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (dev_3940) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.170 |
High resolution limit [Å] | 1.150 | 3.120 | 1.150 |
Rmerge | 0.088 | 0.041 | 0.422 |
Rmeas | 0.095 | 0.045 | 0.456 |
Rpim | 0.036 | 0.019 | 0.172 |
Total number of observations | 324543 | ||
Number of reflections | 45981 | 2359 | 2283 |
<I/σ(I)> | 9.6 | ||
Completeness [%] | 99.7 | 94 | 99.9 |
Redundancy | 7.1 | 5.9 | 6.9 |
CC(1/2) | 0.997 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 292 | 25% w/v PEG3350, 0.2 M ammonium acetate, 0.1 M Bis-Tris |