7RI1
Crystal structure of anti-HIV llama VHH antibody J3 in complex with HIV-1 C1086 gp120
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-24 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 119.090, 119.090, 110.520 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.200 - 2.550 |
R-factor | 0.1787 |
Rwork | 0.176 |
R-free | 0.22520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ngb |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.19-4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 6.510 | 2.400 |
Rmerge | 0.102 | 0.035 | 0.835 |
Total number of observations | 209127 | ||
Number of reflections | 31504 | 1642 | 1550 |
<I/σ(I)> | 9.7 | ||
Completeness [%] | 99.1 | 93 | 99.8 |
Redundancy | 6.6 | 5.3 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1 M OF HEPES BUFFER PH 7.5 AND 1 M OF LITHIUM SULFATE |