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7R9G

Catalytically inactive yeast Pseudouridine Synthase, PUS1, bound to RNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.977
Spacegroup nameC 1 2 1
Unit cell lengths104.195, 98.344, 72.239
Unit cell angles90.00, 102.80, 90.00
Refinement procedure
Resolution49.170 - 2.400
R-factor0.2247
Rwork0.222
R-free0.26400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4j37
RMSD bond length0.002
RMSD bond angle0.509
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.18)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.440
High resolution limit [Å]2.4006.5102.400
Rmerge0.0720.0410.632
Rmeas0.0780.0440.698
Rpim0.0300.0170.291
Total number of observations178541
Number of reflections2763814211300
<I/σ(I)>8
Completeness [%]99.610095.1
Redundancy6.56.55.3
CC(1/2)0.9980.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62770.05 M Ammonium sulfate, 0.05 M Bis-Tris pH 6.0, 26% Pentaerythritol ethoxylate

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PDB entries from 2024-07-10

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