7R3Y
The crystal structure of the V426L variant of Pol2CORE in complex with DNA and an incoming nucleotide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 154.400, 70.100, 159.500 |
Unit cell angles | 90.00, 113.10, 90.00 |
Refinement procedure
Resolution | 47.840 - 2.600 |
R-factor | 0.2227 |
Rwork | 0.220 |
R-free | 0.27020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 4m8o |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.840 | 47.840 | 2.800 |
High resolution limit [Å] | 2.600 | 15.000 | 2.600 |
Rmerge | 0.075 | 0.020 | 1.494 |
Rmeas | 0.089 | 0.024 | 1.774 |
Total number of observations | 330071 | ||
Number of reflections | 96815 | 545 | 19186 |
<I/σ(I)> | 9.21 | 31.1 | 0.75 |
Completeness [%] | 99.5 | 93.6 | 99.7 |
Redundancy | 3.409 | 3.27 | 3.424 |
CC(1/2) | 0.999 | 0.999 | 0.480 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 292 | 50mM MES pH6.5, PEG20K,2.5% glycerol, 150mM Sodium Actetate |