7QI8
CRYSTAL STRUCTURE OF LYSYL-TRNA SYNTHETASE FROM Mycobacterium tuberculosis COMPLEXED WITH L-LYSINE AND INHIBITOR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-23 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.98011 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 84.196, 84.196, 147.984 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.430 - 2.200 |
R-factor | 0.2467 |
Rwork | 0.244 |
R-free | 0.30470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7qh8 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.481 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.330 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.205 | 1.722 |
Rpim | 0.092 | 0.811 |
Number of reflections | 27807 | 2354 |
<I/σ(I)> | 5.8 | 1.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 11.1 | 10.5 |
CC(1/2) | 0.995 | 0.857 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | Reservoir: 0.25 M NaOAc, 14% PEG 3350 Protein: 100 mM HEPES, 150 mM NaCl, 5% glycerol, pH 7.5, ~ 20 mg/ml |