Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QGA

Human CD73 (ecto 5'-nucleotidase) in complex with MRS4598 (a 3-methyl-CMPCP derivative, compound 16 in paper) in the open state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2020-09-16
DetectorRIGAKU HyPix-6000HE
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths67.042, 130.046, 66.004
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution21.890 - 1.500
R-factor0.1656
Rwork0.165
R-free0.18430
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)6tve
RMSD bond length0.008
RMSD bond angle1.020
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareBUSTER
Refinement softwareBUSTER (2.10.4 (20-OCT-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]21.89021.8901.530
High resolution limit [Å]1.5008.2201.500
Rmerge0.0800.0280.721
Rmeas0.0880.0300.827
Rpim0.0350.0100.395
Total number of observations532901570018418
Number of reflections926556244515
<I/σ(I)>13.651.31.8
Completeness [%]99.694.598.8
Redundancy5.89.14.1
CC(1/2)0.9980.9970.603
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.229110 mM 16, 100 microM ZnCl2, 8 % PEG 6000, 0.1 M MES pH 6.2, 20 % PEG200

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon