7QFV
Crystal structure of KLK6 in complex with compound 17a
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-22 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.965 |
Spacegroup name | P 1 |
Unit cell lengths | 38.430, 40.080, 65.210 |
Unit cell angles | 82.08, 84.95, 70.87 |
Refinement procedure
Resolution | 64.520 - 1.560 |
R-factor | 0.1778 |
Rwork | 0.176 |
R-free | 0.21120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vfe |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 64.520 | 64.520 | 1.600 |
High resolution limit [Å] | 1.560 | 6.960 | 1.560 |
Rmerge | 0.098 | 0.059 | 1.213 |
Rmeas | 0.117 | 0.069 | 1.437 |
Total number of observations | 170314 | ||
Number of reflections | 49476 | 581 | 2997 |
<I/σ(I)> | 7.75 | 19.47 | 1.06 |
Completeness [%] | 94.8 | 98.6 | 77.7 |
Redundancy | 3.442 | 3.651 | 3.368 |
CC(1/2) | 0.993 | 0.991 | 0.343 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.20 M trimethylamine N-oxide, 0.1 M Tris-HCl pH8.5, 20% PEG MME 2000 |