7Q99
MHC Class I A02 Allele presenting NLSALGIFST, in complex with Mel5 TCR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-02 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97951 |
Spacegroup name | P 43 |
Unit cell lengths | 121.280, 121.280, 81.314 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.640 - 2.550 |
R-factor | 0.2209 |
Rwork | 0.218 |
R-free | 0.27220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hg1 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.454 |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.650 | 2.590 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.197 | 3.860 |
Rmeas | 0.211 | 4.150 |
Rpim | 0.075 | 1.520 |
Number of reflections | 70731 | 1909 |
<I/σ(I)> | 7.2 | 0.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.8 | 7.4 |
CC(1/2) | 0.995 | 0.221 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1M HEPES, 25% PEG 4000, 15% Glycerol, pH 7.5 |