7Q41
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of ubiquitin-protein ligase E3A (E6AP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-28 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.999882 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 108.952, 108.952, 243.160 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.725 - 3.015 |
R-factor | 0.201297269544 |
Rwork | 0.198 |
R-free | 0.25505 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3kci |
RMSD bond length | 0.009 |
RMSD bond angle | 1.094 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.725 | 3.200 |
High resolution limit [Å] | 3.010 | 3.010 |
Number of reflections | 54825 | 8710 |
<I/σ(I)> | 5.81 | |
Completeness [%] | 99.2 | |
Redundancy | 5.91558595531 | |
CC(1/2) | 0.968 | 0.401 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293.15 | 293.1500 hanging drop 20% PEG 3350 0.18M tris amonium citrate |