7Q1H
Variant D312N of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the substrate OMP at 1.31 Angstrom resolution
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-05 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.68880 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 77.360, 116.318, 62.091 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 34.660 - 1.310 |
| R-factor | 0.1459 |
| Rwork | 0.144 |
| R-free | 0.17780 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7ov0 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 34.650 | 34.650 | 1.320 |
| High resolution limit [Å] | 1.310 | 10.000 | 1.310 |
| Rmerge | 0.058 | 0.022 | 0.998 |
| Rmeas | 0.066 | 0.026 | 1.126 |
| Total number of observations | 300507 | ||
| Number of reflections | 66485 | 161 | 1514 |
| <I/σ(I)> | 14.59 | 56.6 | 1.66 |
| Completeness [%] | 98.5 | 87.5 | 99.5 |
| Redundancy | 4.52 | 3.354 | 4.585 |
| CC(1/2) | 0.999 | 0.999 | 0.655 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion, 5% (w/v) Glycerol |






