7PZ1
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH8535
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 81.191, 81.827, 169.555 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 84.777 - 2.450 |
Rwork | 0.253 |
R-free | 0.29100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6g40 |
RMSD bond length | 0.002 |
RMSD bond angle | 1.189 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 84.800 | 2.540 |
High resolution limit [Å] | 2.450 | 2.450 |
Number of reflections | 42365 | 4385 |
<I/σ(I)> | 15.5 | |
Completeness [%] | 100.0 | |
Redundancy | 13.4 | |
CC(1/2) | 0.999 | 0.530 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 0.12M Ethylene Glycols, 0.1M Buffer System 2 pH7.5, 30.0%v/v GOL_P4K (Morpheus screen, Molecular Dimensions) |