7PVS
Crystal structure of the Abl SH3 domain V73E-A74S-S75R-G76T-D77E-G92N-Y93N-N94T-H95E mutant in presence of PEG 200
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979260 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 27.125, 43.479, 94.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.750 - 1.050 |
R-factor | 0.1695 |
Rwork | 0.169 |
R-free | 0.18430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eg3 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.750 | 19.750 | 1.070 |
High resolution limit [Å] | 1.050 | 5.750 | 1.050 |
Rmerge | 0.044 | 0.020 | 0.638 |
Rmeas | 0.049 | 0.023 | 0.744 |
Rpim | 0.021 | 0.011 | 0.374 |
Total number of observations | 271721 | 1866 | 8357 |
Number of reflections | 52808 | 388 | 2384 |
<I/σ(I)> | 14.8 | 51.7 | 1.9 |
Completeness [%] | 99.3 | 97.5 | 92.9 |
Redundancy | 5.1 | 4.8 | 3.5 |
CC(1/2) | 1.000 | 0.999 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 283 | 2.6 M ammonium sulfate, 5% PEG200, 10% Glicerol, 40mM LiCl, 0.1M MES |