7PUX
Structure of p97 N-D1(L198W) in complex with Fragment TROLL2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 146.234, 146.234, 84.397 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.870 - 1.730 |
R-factor | 0.1942 |
Rwork | 0.192 |
R-free | 0.23530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dyg |
RMSD bond length | 0.006 |
RMSD bond angle | 0.885 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.870 | 1.830 |
High resolution limit [Å] | 1.730 | 1.730 |
Rmerge | 0.137 | 2.498 |
Rmeas | 0.140 | 2.547 |
Rpim | 0.027 | 0.492 |
Number of reflections | 42850 | 2143 |
<I/σ(I)> | 16.684 | 1.63 |
Completeness [%] | 96.1 | 25.31 |
Redundancy | 26.47 | |
CC(1/2) | 0.999 | 0.620 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293.15 | Natriumformiat (pH 6.0) 4.0 M Glycerol (v/v) 10 % PEG 600 (v/v) 5 % |