7PT4
Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) structure in complex with a covalently bound reaction intermediate as well as products formyl-CoA and acetone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-11 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 116.234, 116.234, 312.056 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 100.662 - 1.640 |
Rwork | 0.145 |
R-free | 0.17510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rji |
RMSD bond length | 0.014 |
RMSD bond angle | 1.759 |
Data reduction software | xia2 |
Data scaling software | STARANISO |
Phasing software | MoRDa |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.662 | 1.840 |
High resolution limit [Å] | 1.640 | 1.640 |
Rmerge | 0.189 | 1.539 |
Rpim | 0.030 | 0.249 |
Number of reflections | 98153 | 4908 |
<I/σ(I)> | 15.3 | 1.7 |
Completeness [%] | 96.8 | 82.5 |
Redundancy | 40.1 | 38.7 |
CC(1/2) | 0.999 | 0.878 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2 M ammonium sulfate, 0.1 M HEPES pH 7.0 1 mM 2-Hydroxyisobutyryl-CoA, 5 mM ADP, 5 mM MgCl2, 5 mM ThDP |