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7PPG

CRYSTAL STRUCTURE OF NAMPT IN COMPLEX WITH COMPOUND 9

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-08-28
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.91841
Spacegroup nameP 1 21 1
Unit cell lengths82.956, 106.180, 121.340
Unit cell angles90.00, 96.53, 90.00
Refinement procedure
Resolution48.590 - 2.130
R-factor0.2553
Rwork0.253
R-free0.30250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2gvj
RMSD bond length0.007
RMSD bond angle1.422
Data reduction softwareXDS (VERSION January 10, 2014)
Data scaling softwarepointless (version 1.9.12)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5902.260
High resolution limit [Å]2.1302.130
Rmeas0.1510.570
Number of reflections11493418131
<I/σ(I)>6.892.2
Completeness [%]98.096.1
Redundancy2.672.7
CC(1/2)0.9940.854
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.62931 microliter of protein mixed with 1 microliter of reservoir buffer (27-31% PEG 3350 (w/v), 200 mM NaCl, 100 mM sodium dihydrogen phosphate pH 7.6) incubated for 5 min, then streak seeded (with crystals obtained previously under identical conditions). Ligand added prior to crystallization (2 MILLIMOLAR FROM 100 MILLIMOLAR STOCK IN DMSO) and incubated for 1.5 h at 277 K. CRYO BUFFER consisted of RESERVOIR supplemented WITH 2 MILLIMOLAR INHIBITOR AND 15% ETHYLENGLYCOL

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