7PEE
Crystal structure of extracellular part of human Trop2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9789 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 145.080, 145.080, 217.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.370 - 2.810 |
R-factor | 0.2408 |
Rwork | 0.240 |
R-free | 0.26330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mzv |
RMSD bond length | 0.007 |
RMSD bond angle | 1.075 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.380 | 2.980 |
High resolution limit [Å] | 2.810 | 2.810 |
Number of reflections | 57322 | 9084 |
<I/σ(I)> | 15.14 | 1.85 |
Completeness [%] | 99.6 | 99.4 |
Redundancy | 6.6 | |
CC(1/2) | 0.998 | 0.717 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.8 | 294 | 1.6 M ammonium sulfate, 0.5 M NaCl, 0.0133 M EDTA, 0.1 M MES pH 5.8 |