7PCP
Crystal structure of CD73 in complex with 5-iodouracil in the open form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-02-17 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9184 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 67.220, 131.820, 66.324 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.260 - 1.377 |
| R-factor | 0.1272 |
| Rwork | 0.125 |
| R-free | 0.16640 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 4h2g |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.873 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.260 | 1.400 |
| High resolution limit [Å] | 1.377 | 1.377 |
| Rmerge | 0.054 | 0.768 |
| Number of reflections | 122396 | 5612 |
| <I/σ(I)> | 11.3 | 1.4 |
| Completeness [%] | 99.1 | |
| Redundancy | 3.7 | |
| CC(1/2) | 0.999 | 0.534 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 292 | 7 mg/mL protein concentration, 100 mM Tris pH 7.8, 10 % PEG6000, equal amounts of protein and reservoir. Following crystal formation (1-2 days), the crystals were transferred to soaking solution containing reservoir solution and 10 mM 5-iodouracil. Crystals were then transferred to cryo solution containing an additional 20 % glycerol, soaked for ~2-5 min, and flash frozen in liquid nitrogen. |






