7PCD
HER2 IN COMPLEX WITH A COVALENT INHIBITOR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.009, 94.471, 80.325 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.190 - 1.770 |
R-factor | 0.2101 |
Rwork | 0.207 |
R-free | 0.24060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rcd |
RMSD bond length | 0.012 |
RMSD bond angle | 1.438 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.190 | 2.020 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.064 | 0.438 |
Rmeas | 0.071 | 0.038 |
Number of reflections | 24847 | 90 |
<I/σ(I)> | 10.65 | 3.19 |
Completeness [%] | 95.4 | 97.6 |
Redundancy | 5.1 | 5.1 |
CC(1/2) | 0.999 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.75 | 293 | 18% PEG3350, 50mM ammonium tartrate, 150mM sodium tartrate and 100mM BIS-TRIS |