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7OW4

Crystal structure of HLA-A*11:01 in complex with KRAS G12D peptide (VVVGADGVGK)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-27
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9159
Spacegroup nameP 21 21 21
Unit cell lengths117.224, 121.432, 127.863
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution88.050 - 1.810
R-factor0.22111
Rwork0.220
R-free0.24917
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2hn7
RMSD bond length0.009
RMSD bond angle1.482
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]88.0501.840
High resolution limit [Å]1.8101.810
Rmerge0.2604.611
Rmeas0.2694.778
Rpim0.0691.244
Number of reflections1662128252
<I/σ(I)>8.70.7
Completeness [%]100.0100
Redundancy15.114.5
CC(1/2)0.9980.322
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M Lithium sulfate, 0.1 M Bis-Tris pH 5.5, 25% w/v PEG 3500

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