7NY3
Crystal structure of Paradendryphiella salina PL7A alginate lyase mutant Y223F in complex with tetra-mannuronic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.972425 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.870, 80.920, 80.930 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.470 - 1.820 |
R-factor | 0.1624 |
Rwork | 0.160 |
R-free | 0.21080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ncz |
RMSD bond length | 0.010 |
RMSD bond angle | 1.201 |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.470 | 1.920 |
High resolution limit [Å] | 1.810 | 1.810 |
Number of reflections | 39520 | 5938 |
<I/σ(I)> | 8.33 | |
Completeness [%] | 98.3 | |
Redundancy | 6.99 | |
CC(1/2) | 0.990 | 0.470 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 293 | 20% PEG 1500 and 0.1 M TBG buffer pH 4 |