7NUU
Crystal structure of human AMDHD2 in complex with Zn
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-09-15 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.777, 84.336, 154.166 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 77.083 - 1.836 |
R-factor | 0.183 |
Rwork | 0.182 |
R-free | 0.20560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7nut |
Data reduction software | XDS (Mar 15, 2019) |
Data scaling software | XDS (Mar 15, 2019) |
Phasing software | PHENIX (1.16_3549) |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 77.083 | 1.902 |
High resolution limit [Å] | 1.836 | 1.836 |
Number of reflections | 71036 | 6953 |
<I/σ(I)> | 12.53 | |
Completeness [%] | 99.9 | |
Redundancy | 6.6 | |
CC(1/2) | 0.999 | 0.499 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M Bis tris propane pH 8.25, 0.25 M Sodium nitrate, 20 % PEG3350 |