7NPM
X-ray structure of the adduct formed upon reaction of oxaliplatin with human angiogenin
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ELETTRA BEAMLINE 11.2C |
| Synchrotron site | ELETTRA |
| Beamline | 11.2C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-11-19 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.96 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 37.720, 85.890, 33.390 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.940 - 1.860 |
| Rwork | 0.178 |
| R-free | 0.25370 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5eop |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.628 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 42.945 | 1.890 |
| High resolution limit [Å] | 1.860 | 1.860 |
| Rmerge | 0.171 | 1.220 |
| Rpim | 0.052 | 0.387 |
| Number of reflections | 9691 | 475 |
| <I/σ(I)> | 10.5 | 2.5 |
| Completeness [%] | 99.9 | 100 |
| Redundancy | 11.8 | 10.7 |
| CC(1/2) | 0.995 | 0.803 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.1 | 298 | 10 % PEG6K, 20 mM sodium citrate pH 5.1, 0.2 M sodium/potassium tartrate |






