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7NP9

Structure of the human CR3 - CD11bCD18 specific nanobody hCR3Nb1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-22
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976300
Spacegroup nameI 41 2 2
Unit cell lengths82.781, 82.781, 72.456
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.520 - 1.140
R-factor0.1472
Rwork0.146
R-free0.16690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ehg
RMSD bond length0.010
RMSD bond angle1.163
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19rc5_4047)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]54.5201.181
High resolution limit [Å]1.1401.140
Rmerge0.159
Number of reflections443963194
<I/σ(I)>21.5
Completeness [%]96.4
Redundancy45
CC(1/2)1.0000.807
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2921.5 M AmSO4, 0.1 M BIS-TRIS pH 6.5

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