7NDL
Crystal structure of human GFAT-1 S205D
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2020-12-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9747 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 153.615, 153.615, 166.132 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 90.914 - 2.223 |
R-factor | 0.1765 |
Rwork | 0.176 |
R-free | 0.19340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6r4e |
Data reduction software | XDS (Jan 31, 2020) |
Data scaling software | XDS (Jan 31, 2020) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.914 | 2.303 |
High resolution limit [Å] | 2.223 | 2.223 |
Number of reflections | 97303 | 9193 |
<I/σ(I)> | 22.99 | |
Completeness [%] | 99.5 | |
Redundancy | 25.8 | |
CC(1/2) | 1.000 | 0.581 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M Bis tris propane pH 9.0, 0.3 M Sodium malonate dibasic, 20 % PEG3350 |