7N5P
6218 TCR in complex with H2-Db PA224-233 with a cysteine mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.987 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.334, 72.056, 107.671 |
Unit cell angles | 90.00, 101.28, 90.00 |
Refinement procedure
Resolution | 44.220 - 2.090 |
R-factor | 0.1924 |
Rwork | 0.190 |
R-free | 0.23580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pqy |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.220 | 44.220 | 2.150 |
High resolution limit [Å] | 2.090 | 9.110 | 2.090 |
Rmerge | 0.110 | 0.041 | 1.050 |
Rmeas | 0.119 | 0.045 | 1.151 |
Rpim | 0.046 | 0.017 | 0.462 |
Total number of observations | 321778 | 4071 | 21428 |
Number of reflections | 48373 | 614 | 3680 |
<I/σ(I)> | 11 | 30.2 | 2.2 |
Completeness [%] | 99.9 | 99.4 | 98.9 |
Redundancy | 6.7 | 6.6 | 5.8 |
CC(1/2) | 0.997 | 0.998 | 0.661 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 20% PEG3350, 0.2M NaF, 0.05M NaForm, 1% 1,5-Diaminopentane dihydrochloride |