7MSD
Structure of EED bound to EEDi-6068
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-02-11 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.800, 85.570, 91.916 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.900 - 2.200 |
R-factor | 0.1786 |
Rwork | 0.177 |
R-free | 0.21250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | in-house model |
RMSD bond length | 0.008 |
RMSD bond angle | 1.010 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | BUSTER (2.10.3 (6-FEB-2020)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.240 |
High resolution limit [Å] | 2.200 | 5.970 | 2.200 |
Rmerge | 0.095 | 0.031 | 0.897 |
Rmeas | 0.103 | 0.034 | 0.965 |
Rpim | 0.038 | 0.013 | 0.354 |
Total number of observations | 172046 | ||
Number of reflections | 23519 | 1304 | 1123 |
<I/σ(I)> | 7.2 | ||
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 7.3 | 6.5 | 7.4 |
CC(1/2) | 0.998 | 0.774 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1 M Tris pH 8.5, 20% glycerol, 4.5 M Na Formate, 10 mM TCEP |