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7MOF

Crystal Structure of Arabidopsis thaliana Plant and Fungi Atypical Dual Specificity Phosphatase 1(AtPFA-DSP1 ) Cys150Ser in complex with 6-diphosphoinositol 1,2,3,4,5-pentakisphosphate 6-InsP7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-12-07
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)1
Spacegroup nameP 21 3
Unit cell lengths124.896, 124.896, 124.896
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.530 - 1.950
R-factor0.1117
Rwork0.110
R-free0.15260
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.013
RMSD bond angle2.134
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.980
High resolution limit [Å]1.9501.950
Rmeas0.0650.804
Number of reflections475612387
<I/σ(I)>333.1
Completeness [%]100.0
Redundancy7.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.4 M NaCl, 100 mM HEPES pH7.2, 50 mM beta-mercaptoethanol at 298K (3 ul of 5.5 mg/ml protein plus 1 ul of well buffer in the crystallization drop). The formed crystal was soaked in 30% PEG400, 13mM MgCl2, 33mM NaF, 50 mM beta-mercaptoethanol, 66 mM HEPES, pH 7.2, and 2.5 mM 6-InsP7 for 6 days.

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