7MNU
Crystal Structure of the ZnF7 of Nucleoporin NUP358/RanBP2 in complex with Ran-GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.2828 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 92.720, 92.720, 196.000 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.990 - 2.000 |
R-factor | 0.2027 |
Rwork | 0.202 |
R-free | 0.22420 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.990 | 28.990 | 2.070 |
High resolution limit [Å] | 2.000 | 4.300 | 2.000 |
Rmeas | 0.166 | 0.063 | 2.345 |
Rpim | 0.040 | 0.016 | 0.574 |
Total number of observations | 584705 | 58924 | 55080 |
Number of reflections | 34531 | 3770 | 3346 |
<I/σ(I)> | 14 | 39.5 | 1.4 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 16.9 | 15.6 | 16.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | 19% (w/v) PEG 3350; 0.1 M Bis-Tris |