7MMP
Crystal Structure of the Class Ie Ribonucleotide Reductase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 77.656, 105.331, 138.894 |
Unit cell angles | 90.00, 100.46, 90.00 |
Refinement procedure
Resolution | 49.650 - 2.150 |
R-factor | 0.1963 |
Rwork | 0.195 |
R-free | 0.22420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ebo |
RMSD bond length | 0.003 |
RMSD bond angle | 1.204 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.190 |
High resolution limit [Å] | 2.150 | 5.830 | 2.150 |
Rmerge | 0.112 | 0.062 | 0.500 |
Rmeas | 0.127 | 0.070 | 0.612 |
Rpim | 0.059 | 0.032 | 0.344 |
Total number of observations | 479235 | ||
Number of reflections | 116972 | 6053 | 5308 |
<I/σ(I)> | 6.5 | ||
Completeness [%] | 97.6 | 98.5 | 89.1 |
Redundancy | 4.1 | 4.3 | 2.6 |
CC(1/2) | 0.991 | 0.720 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 17% (w/v) PEG 3350, 0.2 M calcium chloride, 0.1 M Tris pH 8.5 |