7MJ9
HLA-A*02:01 bound to Neuroblastoma Derived mutant IGFBPL1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.03316 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.940, 80.130, 57.740 |
Unit cell angles | 90.00, 114.28, 90.00 |
Refinement procedure
Resolution | 52.630 - 1.750 |
R-factor | 0.1622 |
Rwork | 0.160 |
R-free | 0.19440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c07 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.120 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.630 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.077 | 0.383 |
Number of reflections | 44403 | 2298 |
<I/σ(I)> | 10.8 | 2.6 |
Completeness [%] | 98.4 | |
Redundancy | 6.2 | |
CC(1/2) | 0.990 | 0.860 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.2 M Magnesium Chloride, 0.1 M HEPES pH 7, 20 % PEG 6000 |