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7M10

PHF2 PHD Domain Complexed with Peptide From N-terminus of VRK1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-06
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.00000
Spacegroup nameI 2 2 2
Unit cell lengths34.240, 63.717, 103.152
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.500 - 1.150
R-factor0.157
Rwork0.157
R-free0.16480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3kqi
RMSD bond length0.004
RMSD bond angle0.785
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.1_4122)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.5001.190
High resolution limit [Å]1.1501.150
Rmerge0.1060.579
Rpim0.0340.370
Number of reflections33230991
<I/σ(I)>20.11.5
Completeness [%]81.524.7
Redundancy9.12.3
CC(1/2)1.0000.740
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.22923.5M Sodium Formate,100mM TRIS pH 8.2

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