7LUY
Crystal Structure of guanylate kinase from Bartonella henselae str. Houston-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-05-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9774 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 85.820, 101.910, 86.660 |
Unit cell angles | 90.00, 115.98, 90.00 |
Refinement procedure
Resolution | 45.710 - 2.300 |
R-factor | 0.2002 |
Rwork | 0.198 |
R-free | 0.25250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2f3t in two domains as per Morda |
RMSD bond length | 0.006 |
RMSD bond angle | 0.739 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | PHENIX (1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.360 |
High resolution limit [Å] | 2.300 | 10.290 | 2.300 |
Rmerge | 0.063 | 0.015 | 0.622 |
Rmeas | 0.071 | 0.017 | 0.701 |
Number of reflections | 59593 | 692 | 4389 |
<I/σ(I)> | 19.22 | 67.66 | 2.59 |
Completeness [%] | 99.7 | 97.7 | 99.8 |
Redundancy | 4.574 | 4.223 | 4.616 |
CC(1/2) | 0.999 | 1.000 | 0.786 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 287 | RigakuReagents JCSG+ screen, condition H9: 200mM lithium sulfate, 100mM BisTris pH 5.5, 25% (w/V) PEG 3350: BaheA.00713.a.A1.PS00367 at 20mg/ml: tray 205529 H9: cryoprotectant: 25% ethylene glycol: puck: ekw2-5 |