7LOS
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-65
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.1271 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.564, 146.184, 60.321 |
Unit cell angles | 90.00, 99.53, 90.00 |
Refinement procedure
Resolution | 43.850 - 2.900 |
R-factor | 0.2135 |
Rwork | 0.209 |
R-free | 0.29290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jrn |
RMSD bond length | 0.005 |
RMSD bond angle | 1.410 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.730 | 3.080 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.981 | |
Rmeas | 0.293 | |
Rpim | 0.164 | 0.654 |
Number of reflections | 17292 | 2801 |
<I/σ(I)> | 4.7 | 1.4 |
Completeness [%] | 98.1 | 99.4 |
Redundancy | 3 | 3.1 |
CC(1/2) | 0.956 | 0.465 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289 | 0.1M MIB buffer pH 6.5, 0.2 M (NH4)2SO4, 13-16% PEG 3350, 20% glycerol |