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7LO9

RNA dodecamer containing a GNA A residue

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-15
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9184
Spacegroup nameP 32
Unit cell lengths29.370, 29.370, 133.140
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution23.760 - 1.780
R-factor0.1959
Rwork0.195
R-free0.22590
Structure solution methodSAD
RMSD bond length0.002
RMSD bond angle0.534
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareSHELXDE
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]26.7001.830
High resolution limit [Å]1.7801.780
Number of reflections246201274
<I/σ(I)>17.8
Completeness [%]99.6
Redundancy26.7
CC(1/2)0.9990.792
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7293drop containing 0.5 mM oligonucleotide, 2.3 mM HoCl3, 40 mM NaCl, 5 mM spermine 4HCl, 20 mM Na cacodylate, pH 7.0 equilibrated against 40% MPD

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PDB entries from 2024-08-28

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