7LL5
High-resolution crystal structure of human JAK2 kinase domain (JH1) bound to PN5-150.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-16 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9700 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 114.297, 68.970, 49.629 |
Unit cell angles | 90.00, 98.02, 90.00 |
Refinement procedure
Resolution | 39.160 - 1.500 |
R-factor | 0.1958 |
Rwork | 0.195 |
R-free | 0.22100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ugc |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4085) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 58.900 | 58.900 | 1.530 |
High resolution limit [Å] | 1.500 | 8.220 | 1.500 |
Rmerge | 0.132 | 0.058 | 1.049 |
Rmeas | 0.146 | 0.064 | 1.149 |
Rpim | 0.060 | 0.026 | 0.463 |
Total number of observations | 344180 | 2097 | 17629 |
Number of reflections | 60131 | 390 | 2963 |
<I/σ(I)> | 8.1 | 18.8 | 2.1 |
Completeness [%] | 98.5 | 99.3 | 98.5 |
Redundancy | 5.7 | 5.4 | 5.9 |
CC(1/2) | 0.995 | 0.995 | 0.664 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.8M Sodium Malonate pH 6.0 |