7KVL
SARS-CoV-2 Main protease immature form - FMAX Library E01 fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS SIRIUS BEAMLINE MANACA |
Synchrotron site | LNLS SIRIUS |
Beamline | MANACA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-03 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.35502 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.659, 101.940, 101.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.090 - 2.090 |
R-factor | 0.193 |
Rwork | 0.191 |
R-free | 0.22720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7kfi |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.090 | 72.090 | 2.200 |
High resolution limit [Å] | 2.090 | 6.600 | 2.090 |
Rmerge | 0.161 | 0.055 | 1.013 |
Rmeas | 0.176 | 0.060 | 1.099 |
Rpim | 0.070 | 0.024 | 0.421 |
Total number of observations | 261016 | 9309 | 40357 |
Number of reflections | 41380 | 1505 | 6123 |
<I/σ(I)> | 10 | 26.5 | 2.5 |
Completeness [%] | 96.8 | 99.7 | 99.9 |
Redundancy | 6.3 | 6.2 | 6.6 |
CC(1/2) | 0.996 | 0.997 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M MES, pH 6.7, 5% DMSO, 8% PEG4000 |