Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7KQL

Anti-Tim3 antibody Fab complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2017-03-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths66.105, 63.856, 66.407
Unit cell angles90.00, 94.25, 90.00
Refinement procedure
Resolution48.560 - 1.490
R-factor0.1778
Rwork0.177
R-free0.20020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5f71 4nzu
RMSD bond length0.009
RMSD bond angle1.335
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5601.543
High resolution limit [Å]1.4901.490
Rmerge0.0560.475
Rmeas0.0680.568
Rpim0.0380.308
Number of reflections889868955
<I/σ(I)>13.012.33
Completeness [%]98.799.62
Redundancy3.23.3
CC(1/2)0.9900.884
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP295Crystals of Tim3.18 hTim3 IgV were grown in hanging drops at 22C containing 1 uL protein and 1 uL well solution consisting of optimized conditions of 0.1M MES pH 7.0 and 14.6-15.4% PEG 3350, Single crystals were harvested with glycerol as the cryoprotectant, and flash frozen in liquid nitrogen.

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon