7KLP
Crystal structure of a three-tetrad, parallel, K+ stabilized human telomeric G-quadruplex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 196 |
Detector technology | PIXEL |
Collection date | 2018-04-27 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9791 |
Spacegroup name | P 6 |
Unit cell lengths | 56.686, 56.686, 42.310 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.310 - 1.350 |
R-factor | 0.1455 |
Rwork | 0.142 |
R-free | 0.17610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fxm |
RMSD bond length | 0.013 |
RMSD bond angle | 1.414 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (1.18.2_3874) |
Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.170 | 1.360 |
High resolution limit [Å] | 1.340 | 1.340 |
Rmerge | 0.048 | 6.026 |
Rmeas | 0.051 | 6.423 |
Rpim | 0.017 | 2.187 |
Number of reflections | 32545 | 809 |
<I/σ(I)> | 17.3 | 0.4 |
Completeness [%] | 99.4 | 91.4 |
Redundancy | 8.9 | 8.2 |
CC(1/2) | 1.000 | 0.320 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 50 mM Li Cac pH 7.2, 200 mM KCl, 500 mM (NH4)2SO4, 23% PEG400 |