7KIV
Crystal structure of Pseudomonas aeruginosa PBP3 in complex with avibactam
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X17B1 |
Synchrotron site | NSLS |
Beamline | X17B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97928 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.878, 80.073, 87.793 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.581 - 2.389 |
R-factor | 0.1963 |
Rwork | 0.193 |
R-free | 0.25770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pbq |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.581 | 29.580 | 2.450 |
High resolution limit [Å] | 2.389 | 10.690 | 2.390 |
Rmerge | 0.196 | 0.055 | 0.923 |
Rmeas | 0.227 | 0.061 | 1.007 |
Rpim | 0.090 | 0.027 | 0.396 |
Total number of observations | 1174 | 8159 | |
Number of reflections | 19459 | 247 | 1323 |
<I/σ(I)> | 10.9 | 29.1 | 2.3 |
Completeness [%] | 99.3 | 93.8 | 93.4 |
Redundancy | 6.3 | 4.8 | 6.2 |
CC(1/2) | 0.993 | 0.997 | 0.733 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 30% polyethylene glycol 4000, 0.2 M MgCl2, 0.1 M Tris pH 8.5 |