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7KII

Muscovy duck circovirus Rep domain complexed with a single-stranded DNA 10-mer comprising the cleavage site and Mn2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2020-09-27
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97910
Spacegroup nameI 2 2 2
Unit cell lengths55.417, 66.343, 71.259
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.560 - 1.300
R-factor0.151
Rwork0.149
R-free0.18430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6wdz
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5601.346
High resolution limit [Å]1.3001.300
Rmerge0.0530.368
Rmeas0.0590.419
Rpim0.0250.196
Number of reflections321953197
<I/σ(I)>12.242.18
Completeness [%]98.499.35
Redundancy4.64.3
CC(1/2)0.9980.943
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.82980.1 M sodium acetate, pH 4.8, 20 mM Calcium chloride, 26% 2-methyl-2,4-pentanediol, 30% polyethylene glycol 200 added to drop

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