7KFA
PCSK9 in complex with PCSK9i a 13mer cyclic peptide LDLR disruptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-14 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.422, 70.338, 150.623 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.670 - 2.450 |
R-factor | 0.1919 |
Rwork | 0.189 |
R-free | 0.24170 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 2qtw |
RMSD bond length | 0.005 |
RMSD bond angle | 0.824 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | FFT |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.670 | 2.580 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.082 | 0.555 |
Rmeas | 0.096 | 0.665 |
Rpim | 0.096 | 0.335 |
Number of reflections | 23342 | 3405 |
<I/σ(I)> | 10.6 | 2.3 |
Completeness [%] | 94.2 | 78.4 |
Redundancy | 3.2 | 3.2 |
CC(1/2) | 0.997 | 0.784 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 20.0% PEG-6000, 0.1M TRIS |