7KAF
The crystal structure of the 2009/H1N1/California PA endonuclease I38T (construct with truncated loop 51-72) in complex with baloxavir acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 89.824, 89.824, 133.773 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.060 - 2.250 |
R-factor | 0.1948 |
Rwork | 0.192 |
R-free | 0.23520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vpt |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_3965) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.060 | 2.330 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.064 | 0.556 |
Rmeas | 0.104 | 0.744 |
Rpim | 0.032 | 0.332 |
Number of reflections | 12419 | 762 |
<I/σ(I)> | 12 | 1.4 |
Completeness [%] | 93.1 | |
Redundancy | 9.3 | |
CC(1/2) | 1.000 | 0.679 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10mM MnCl2, 10mM MgCl2, 0.5% Polyvinylpyrrolidone K15 |