7K6W
Structure of the PTP-like myo-inositol phosphatase from Desulfovibrio magneticus in complex with myo-inositol hexakisphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.839, 95.989, 103.610 |
Unit cell angles | 90.00, 92.09, 90.00 |
Refinement procedure
Resolution | 48.960 - 2.300 |
R-factor | 0.1962 |
Rwork | 0.196 |
R-free | 0.21960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mmj |
RMSD bond length | 0.003 |
RMSD bond angle | 0.589 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.960 | 2.360 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 60960 | 4485 |
<I/σ(I)> | 6.6 | |
Completeness [%] | 99.8 | |
Redundancy | 2.9 | |
CC(1/2) | 0.991 | 0.503 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | PEG 4000 and 1000, 2-methyl-2,4-pentanediol, carboxylates, sodium acetate |